CDS

Accession Number TCMCG034C23658
gbkey CDS
Protein Id XP_008390608.2
Location complement(join(12772281..12772954,12773172..12773242,12773350..12773524,12773614..12773734,12773848..12774165,12774559..12774747))
Gene LOC103452850
GeneID 103452850
Organism Malus domestica

Protein

Length 515aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA534520
db_source XM_008392386.3
Definition probable polygalacturonase [Malus domestica]

EGGNOG-MAPPER Annotation

COG_category I
Description positive regulation of rRNA processing
KEGG_TC -
KEGG_Module M00373        [VIEW IN KEGG]
M00741        [VIEW IN KEGG]
KEGG_Reaction R01859        [VIEW IN KEGG]
KEGG_rclass RC00097        [VIEW IN KEGG]
RC00609        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K01966        [VIEW IN KEGG]
ko:K14546        [VIEW IN KEGG]
EC 2.1.3.15        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.4.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00280        [VIEW IN KEGG]
ko00630        [VIEW IN KEGG]
ko00640        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko03008        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00630        [VIEW IN KEGG]
map00640        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0001650        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006356        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033553        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034455        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045943        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090069        [VIEW IN EMBL-EBI]
GO:0090070        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000232        [VIEW IN EMBL-EBI]
GO:2000234        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTTGTGTCATTCAACAATTAATGCCTGTACACCACCACACGGTTAGAGCAATAAGGCAGCCCTTGCTCCTTGGTTGCTCTGCTTCTTCTTCTTCTTCTTCTTCCTTGTCCTTCTCTGCTCTGCACTTCTACTGCTTTTTGGCCACTCCTGCTGCAGAGAGAGAGCTTTCACTCATGAAGATGCTAGTGGTGCTTCTGCTGCTGCTGGCCGTGAGTAATGCCGTCGAAATTGACGGAGAAGACGATGAGAAACCGTGTGATAATAAACTGACATTAGAGCCAAGGCCGCACAGTGTGTCCATCTTAGAATTTGGCGCTGTCGGAGATGGCAAGACATTGAACACTCTTGCCTTTCAGAATGCCATCTTCTATCTCAAGTCTTTCGCCGATAAGGGCGGTGCTCAGCTCTATGTGCCGCCGGGGAGGTGGCTTACCGGAAGCTTCAACCTCACCAGCCACCTCACACTGTTTTTGGAAAAGGATGCTGTCATTCTTGGATCTCAGGATCCGTCTCATTGGGAAATTGTTGAGCCTTTACCCTCGTACGGTCGAGGGATTGAACTCCCCGGGAGGAGATATCGTAGCTTGATAAATGGTTATATGTTACATGATGTGGTCATAACAGGTGATAATGGAACCATCAATGGCCAGGGATCGGTTTGGTGGGATTGGTTTAGCTCCCAATCTCTGAACTACAGCCGCCCGCATCTTGTGGAATTCGTTATGTCTAAATACGTGGTGGTTTCGAACCTCACATTTGTAAATGCTCCCGCTTACAACATCCATCCAGTCTATTGCAGTAATGTACATGTTCTCAACATATCTGTATCTGCTCCTCCGGACTCCCCTCATACTGTCGGAATAGTCCCAGATTCTTCTGATACTGTGTGCATAGAAGATTGCATCATTGGCATGGGGTATGATGCCATTGCTCTCAAGAGTGGTTGGGACGAGTACGGTATTGCCTATGGAAGACCTACCACAAATGTACACATCCGGCATGTCACCTTACAATCAGCTACTGGTTCTTCTCTTGCCCTTGGTAGTGAGATGTCCGGTGGCATTTCTAACGTACATGTTGAGCAGGTCCGCCTCCACAACTCCATTAGCGGCATTCAGTTCCGAACAACAAAGGGTAGAGGCGGTTACATCAAAGACATCATCATATCAGATGTCGAAGTAGAAAACATCTACATGGCATTTGGTGCCTCTGGCCAGTTTGGTTCTCATCCTGATGACAAATATGATCCTAACGCTCTCCCTGTTTTGGATCACATCACATTGCAAGACGTGGTTGGCACAAACATCACCATTGCCGGATGCTTCACTGGCATCGAAGAATCACCATTCACTTCTTTCTGTCTATCCAACATCTCCTTATCATTAAATTCAGCTTCGCCCACCACTTGGGATTGTTCATATGTTTCCGGCTCTTCTGAGTCTGTCTTTCCAGAACCATGTTCTGACCTCAATACCTCGTATTCAAATCCTTCCTCCGCCCACATTTCGCTGCTCACCGGGAATGGAAAAGCCGTGGTCTTATGA
Protein:  
MLCVIQQLMPVHHHTVRAIRQPLLLGCSASSSSSSSLSFSALHFYCFLATPAAERELSLMKMLVVLLLLLAVSNAVEIDGEDDEKPCDNKLTLEPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHLTLFLEKDAVILGSQDPSHWEIVEPLPSYGRGIELPGRRYRSLINGYMLHDVVITGDNGTINGQGSVWWDWFSSQSLNYSRPHLVEFVMSKYVVVSNLTFVNAPAYNIHPVYCSNVHVLNISVSAPPDSPHTVGIVPDSSDTVCIEDCIIGMGYDAIALKSGWDEYGIAYGRPTTNVHIRHVTLQSATGSSLALGSEMSGGISNVHVEQVRLHNSISGIQFRTTKGRGGYIKDIIISDVEVENIYMAFGASGQFGSHPDDKYDPNALPVLDHITLQDVVGTNITIAGCFTGIEESPFTSFCLSNISLSLNSASPTTWDCSYVSGSSESVFPEPCSDLNTSYSNPSSAHISLLTGNGKAVVL